Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015933775.1_cds_XP_016479968.1_71457
CDS Infomation

[gene=LOC107801198] [db_xref=GeneID:107801198] [protein=protein CbbX-like] [protein_id=XP_016479968.1] [location=complement(join(101026..101577,101662..101801,102096..102399,102480..102590,102682..102780,102905..103015,104394..104531))] [gbkey=CDS]
Sequence

ATGCAGCGGCCGCGGGATCAACGGTCAAGATCCTCAAGGCCCACAACCATTCATGGCTTA
GCACAATCTGGAAATGTTGTTGCCTTTCGAAAGATGCTCAATGACAACCCTTCTCTTCTC
AATGAACGCAACCCTATTATGGTGCATACACCTCTTCATGTCGCTGCTGGTTACAACAAT
GTTGAAATACTTAAGTTTTTGCTTGGTTGGTCGGGCCTAGAAAAGGTCGAGCTAGAAGCC
AGGAACATGTATGGAGAGACGCCATTGCACATGGCAGCCAAGAATGGGTGTAACGAAGCA
ACGAAAGTGCTTCTTGCTCATGGTGCTATTGTTGAAGCCAGAGCCAATAATGGGATGACT
CCTTTGCACCTTGCTGTTTGGCACTCACTGCGAGCCGAAGACTATTCAACAGTAAAGACA
TTGTTGGAGTATGACGCGGATTGTAGTGCTGAAGACAATGAGGGCATGGCTCCTATAAAT
CATCTCTCTCATGGCCCTGGAAATGAAAAATTGCGCGAGCTTCTCCACCATTATCTTGAA
GAACAAAGAAAACGTAAAGCCATTGAAGCATGCAGCCAGACCAAAGCTAAAATGGATGAA
CTTGAACATGAATTATCTACAATAGTGGGATTGGACGAACTTAAACTGCAGCTCCGCAAA
TGGGCAAAGGGGATGCTCTTGGATGAGAGGCGTAAGGCCCTAGGGCTTAAAGTTGGTGCA
AGAAGACCGCCCCATATGGCTTTCCTTGGAAACCCTGGAACAGGAAAAACTATGGTTGCT
CGCATTCTTGGAAAATTACTTCATATGGTGGGGATTCTTCCCACTGACAAGGTGACAGAG
GTGCAGAGAACAGATCTGGTTGGTGAATTTGTTGGTCATACAGGACCAAAGACAAGGAGA
AAGATCCAAGAAGCTGAAGGGGGGATTCTTTTCGTTGATGAAGCCTATCGATTAATACCT
ATGCAGAAATCAGATGATAAGGACTATGGTTTGGAAGCACTAGAGGAGATAATGTCAGTC
ATGGATAGTGGAAAAATTGTAGTAATCTTTGCAGGTTACAGTGAACCAATGAAGCGTGTG
ATCACTTCTAACGAAGGTTTCTGTAGACGAGTGACAAAATTTTTCCATTTTGACAACTTT
AGCTCTGAAGACCTTGCCAAGATTCTTCATCTTAAGATGACCAATCAAGCTGATAGTAGC
TTGCTATACGGATTTAAGTTGCATCCTTCATGTACTGTTGATGCTGTTGCATCACTTATC
AAGGAAGAGATCACTGAAAAGCAGCGCAAGGAGATGAATGGAGGTCTAGTGGATCCAATG
CTAGTTAATGCAAGAGAAAATTTGGATCTCAGACTCAGTTTTGACTGTATAGACTCAGGC
CAACTATTAACAATTACTTTGGAGGACTTAAAAGCTGGTCTTCAATTGTTGTCGCAAACA
GGAGTTGCAGCTTAG

Peptide Sequence

PEP ID

XP_016479968.1
PEP Infomation

PREDICTED: protein CbbX-like [Nicotiana tabacum]
Sequence

MQRPRDQRSRSSRPTTIHGLAQSGNVVAFRKMLNDNPSLLNERNPIMVHTPLHVAAGYNN
VEILKFLLGWSGLEKVELEARNMYGETPLHMAAKNGCNEATKVLLAHGAIVEARANNGMT
PLHLAVWHSLRAEDYSTVKTLLEYDADCSAEDNEGMAPINHLSHGPGNEKLRELLHHYLE
EQRKRKAIEACSQTKAKMDELEHELSTIVGLDELKLQLRKWAKGMLLDERRKALGLKVGA
RRPPHMAFLGNPGTGKTMVARILGKLLHMVGILPTDKVTEVQRTDLVGEFVGHTGPKTRR
KIQEAEGGILFVDEAYRLIPMQKSDDKDYGLEALEEIMSVMDSGKIVVIFAGYSEPMKRV
ITSNEGFCRRVTKFFHFDNFSSEDLAKILHLKMTNQADSSLLYGFKLHPSCTVDAVASLI
KEEITEKQRKEMNGGLVDPMLVNARENLDLRLSFDCIDSGQLLTITLEDLKAGLQLLSQT
GVAA

Transcript Sequence

Gene sequence data has not been registered.